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Here we describe the development of a PathoChip array that detects both DNA and RNA from thousands of viruses and pathogenic microbes using tumor tissues.
Data generated by the Sequencing Quality Control Consortium (SEQC) has shown that RNA-Seq and microarray-based gene expression models are comparable in clinical endpoint prediction performance.
In this study, we modified the existing gene expression microarray protocol to allow processing of samples starting from 250 pg of total RNA.